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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889843.1_cds_XP_016444511.1_39563
CDS Infomation

[gene=LOC107769769] [db_xref=GeneID:107769769] [protein=homogentisate phytyltransferase 1, chloroplastic-like] [protein_id=XP_016444511.1] [location=join(35355..35430,36438..36724,37131..37214,37294..37368,37950..38033,38976..39065,45310..45411,45855..45950,50939..51010,51106..51201,52277..52381,53746..53787)] [gbkey=CDS]
Sequence

ATGGAGTCTTTGCTTATTAGGTCGTTTCAGAGACCATCCGTTCCACTTGCAGCAGAGTTC
TCTCCACTCAAAACCAGTTCACGCACAATATTACGAGTTTTGAAGTGTAAAGCATGGAAG
AGACCAGGAAAGCACGATTCCACTTCTATGAAGTTGCAAAGGCAGTATATGACGCAGGAG
CTTGTTGGAGGCAGTTATGGAAGCATTATTCCCACTGATCGAAAACTTAAAGAGAGGTTT
TTGGTGCATGCATCCTCTGAACATCCTCTTGAATCTCAACCTTCAAAGAGTCCATGGAAC
TCAGTGCATGATGCAGTGGATGCTTTCTACAGGTTCTCGCGGCCCCATACCGTAATAGGA
ACAGCATTGAGCATAATTTCAGTTTCTCTCCTTGCAGTTGAGAAGTTCTCTGATTTCTCT
CCATTATTTTTTACCGGGATGTTACAGGCTATTGTTGCTGCCCTATTCATGAATATTTAC
ATAGTTGGTTTAAACCAGTTGTCTGATATTGAAATAGACAAGGTAAACAAGCCATATCTT
CCATTGGCATCAGGGGAATACTCTTTGCAGACTGGAGTAATTATCGTGTCGTCTTTCGCC
ATTCTGAGTTTTTGGCTTGGATGGATCGTTGGTTCCTGGCCTTTATTTTGGGCTCTATTC
ATCAGTTTTGTACTAGGAACTGCCTACTCAATCAACCTGCCACTTTTGAGATGGAAGAGA
TTTCCCTTGGTTGCTGCAATGTGCATCTTTGCTGTACGAGCAGTGATAGTTCAGATAGCC
TTTTATTTGCATATTCAGACTTATGTGTACAGAAGACCAGCTGTCCTTTCAAGACCTTTG
ATATTTGCAACAGCATTCATGAGCTTTTTCTCAGTTGTTATAGCATTATTCAAGGATATA
CCTGATATTGTTGGTGACAAGATTTTCGGAATTCAATCTTTTACTGTGCGCTTGGGTCAA
GAGAAGGTCTTTTGGATTTGTATATCTCTTCTCGAAATGGCTTATCTTGTTGCCATTGTA
GTGGGTGCAACTTCTTCCAACATCTGGAGCAAATATTTTACTGTTGTTGGTCATGCTGCT
TTGGCTCTTTTACTTTGGACTCGAGCCAAATCAATTGATTTCAGTAGAAAAGCGGCAATA
ACATCTTTTTACATGTTCATATGGAAGCTTTTCTATGCAGAGTATTTGCTCATACCACTT
GTGAGGTGA

Peptide Sequence

PEP ID

XP_016444511.1
PEP Infomation

PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MESLLIRSFQRPSVPLAAEFSPLKTSSRTILRVLKCKAWKRPGKHDSTSMKLQRQYMTQE
LVGGSYGSIIPTDRKLKERFLVHASSEHPLESQPSKSPWNSVHDAVDAFYRFSRPHTVIG
TALSIISVSLLAVEKFSDFSPLFFTGMLQAIVAALFMNIYIVGLNQLSDIEIDKVNKPYL
PLASGEYSLQTGVIIVSSFAILSFWLGWIVGSWPLFWALFISFVLGTAYSINLPLLRWKR
FPLVAAMCIFAVRAVIVQIAFYLHIQTYVYRRPAVLSRPLIFATAFMSFFSVVIALFKDI
PDIVGDKIFGIQSFTVRLGQEKVFWICISLLEMAYLVAIVVGATSSNIWSKYFTVVGHAA
LALLLWTRAKSIDFSRKAAITSFYMFIWKLFYAEYLLIPLVR

Transcript Sequence

Gene sequence data has not been registered.